STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PJIAN_482Glyoxylase, beta-lactamase superfamily II. (251 aa)    
Predicted Functional Partners:
GAT61699.1
Glyoxylase, beta-lactamase superfamily II.
  
  
  0.815
GAT62887.1
NADPH-dependent 2,4-dienoyl-CoA reductase.
  
 0.814
GAT62147.1
D-lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 
 0.722
GAT61821.1
D-lactate dehydrogenase.
    
 0.701
argS
arginyl-tRNA synthetase.
       0.465
ybeY
rRNA maturation RNase YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
    
 
 0.406
GAT62886.1
Rhodanese-related sulfurtransferase.
   
 0.401
GAT63086.1
Rhodanese-related sulfurtransferase.
   
 0.401
GAT63100.1
NigD-like protein.
   
 0.401
GAT64160.1
Hypothetical protein.
   
 0.401
Your Current Organism:
Paludibacter jiangxiensis
NCBI taxonomy Id: 681398
Other names: CGMCC 1.5150, JCM 17480, KCTC 5844, P. jiangxiensis, Paludibacter jiangxiensis Qiu et al. 2016, Porphyromonadaceae bacterium NM7, strain NM7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.