STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_05733Uncharacterized protein. (702 aa)    
Predicted Functional Partners:
TCAL_10812
J domain-containing protein.
   
 
 0.712
TCAL_07457
Uncharacterized protein.
      
 0.552
TCAL_06293
Uncharacterized protein.
      
 0.546
TCAL_06763
UPF0020 domain-containing protein.
      
 0.544
TCAL_04110
3'-5' exonuclease domain-containing protein.
      
 0.543
TCAL_01164
Plug_translocon domain-containing protein.
   
  
 0.488
TCAL_07448
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
    
 
 0.452
TCAL_06619
Uncharacterized protein.
   
  
 0.445
TCAL_06821
Uncharacterized protein.
      
 0.414
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.