STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_04906Uncharacterized protein. (882 aa)    
Predicted Functional Partners:
TCAL_15173
Uncharacterized protein.
 
      0.900
TCAL_01566
Uncharacterized protein.
   
 0.762
TCAL_07126
Uncharacterized protein.
    
 0.687
TCAL_16839
Uncharacterized protein.
   
 0.576
TCAL_04978
Uncharacterized protein.
   
 0.576
TCAL_10325
Protein kinase domain-containing protein.
    
  0.570
TCAL_08901
Protein kinase domain-containing protein.
    
  0.570
TCAL_04200
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
   
 
0.524
TCAL_07709
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
   
 
0.524
TCAL_08438
Uncharacterized protein.
   
 
0.524
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.