STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_02071Uncharacterized protein; Belongs to the GST superfamily. (196 aa)    
Predicted Functional Partners:
TCAL_10813
Uncharacterized protein.
   
 0.975
TCAL_03482
Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
     
 0.808
TCAL_05110
Glutathione synthetase.
    
 0.808
TCAL_10595
Nucleoside diphosphate kinase; Belongs to the NDK family.
   
 0.764
TCAL_05115
EF1_GNE domain-containing protein; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.764
TCAL_03152
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 0.756
TCAL_02198
Thioredoxin domain-containing protein.
   
 0.724
TCAL_09184
Uncharacterized protein.
   
 0.724
TCAL_00773
Tyrosine--tRNA ligase.
   
 0.715
TCAL_08389
Uncharacterized protein; Belongs to the GST superfamily.
   
 0.697
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.