STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_16156Uncharacterized protein. (156 aa)    
Predicted Functional Partners:
TCAL_05635
Uncharacterized protein.
   
 0.832
TCAL_10059
Uncharacterized protein.
   
 0.709
TCAL_08516
Uncharacterized protein.
   
 0.709
TCAL_05972
Uncharacterized protein.
   
 0.694
TCAL_13626
Uncharacterized protein.
   
 0.694
TCAL_14965
Uncharacterized protein.
   
 0.685
TCAL_05540
Uncharacterized protein.
   
 0.685
TCAL_14007
Uncharacterized protein.
   
 0.684
TCAL_00204
Uncharacterized protein.
   
 0.684
TCAL_06973
Uncharacterized protein.
   
 0.684
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.