TCAL_04538 protein (Tigriopus californicus) - STRING interaction network

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second shell of interactors

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Known Interactions

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Predicted Interactions

gene neighborhood

gene fusions

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textmining

co-expression

protein homology

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[Homology]

Score

TCAL_04538

Uncharacterized protein. (338 aa)

Predicted Functional Partners:

TCAL_01865

0.999

TCAL_00552

0.999

TCAL_00663

0.999

TCAL_04015

0.998

TCAL_02097

0.998

TCAL_08213

0.998

TCAL_13158

0.998

TCAL_12791

0.998

TCAL_05506

0.997

TCAL_04837

0.997

Your Current Organism:

Tigriopus californicus

NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TCAL_00552	TCAL_00663	A0A553PAM9	A0A553PBR7	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	CP-type G domain-containing protein.	0.999
TCAL_00552	TCAL_01865	A0A553PAM9	A0A553P7G3	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	Brix domain-containing protein.	0.986
TCAL_00552	TCAL_02097	A0A553PAM9	A0A553NDE3	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	RRM domain-containing protein.	0.997
TCAL_00552	TCAL_04015	A0A553PAM9	A0A553NCL6	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	Brix domain-containing protein.	0.996
TCAL_00552	TCAL_04538	A0A553PAM9	A0A553PAX7	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	Uncharacterized protein.	0.999
TCAL_00552	TCAL_04837	A0A553PAM9	A0A553NZ82	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	Brix domain-containing protein.	0.983
TCAL_00552	TCAL_05506	A0A553PAM9	A0A553NPZ1	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	Uncharacterized protein.	0.999
TCAL_00552	TCAL_08213	A0A553PAM9	A0A553NE34	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.	0.984
TCAL_00552	TCAL_12791	A0A553PAM9	A0A553NUW3	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	Uncharacterized protein.	0.994
TCAL_00552	TCAL_13158	A0A553PAM9	A0A553NQS0	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.994
TCAL_00663	TCAL_00552	A0A553PBR7	A0A553PAM9	CP-type G domain-containing protein.	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	0.999
TCAL_00663	TCAL_01865	A0A553PBR7	A0A553P7G3	CP-type G domain-containing protein.	Brix domain-containing protein.	0.996
TCAL_00663	TCAL_02097	A0A553PBR7	A0A553NDE3	CP-type G domain-containing protein.	RRM domain-containing protein.	0.999
TCAL_00663	TCAL_04015	A0A553PBR7	A0A553NCL6	CP-type G domain-containing protein.	Brix domain-containing protein.	0.999
TCAL_00663	TCAL_04538	A0A553PBR7	A0A553PAX7	CP-type G domain-containing protein.	Uncharacterized protein.	0.999
TCAL_00663	TCAL_04837	A0A553PBR7	A0A553NZ82	CP-type G domain-containing protein.	Brix domain-containing protein.	0.995
TCAL_00663	TCAL_05506	A0A553PBR7	A0A553NPZ1	CP-type G domain-containing protein.	Uncharacterized protein.	0.999
TCAL_00663	TCAL_08213	A0A553PBR7	A0A553NE34	CP-type G domain-containing protein.	60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.	0.992
TCAL_00663	TCAL_12791	A0A553PBR7	A0A553NUW3	CP-type G domain-containing protein.	Uncharacterized protein.	0.998
TCAL_00663	TCAL_13158	A0A553PBR7	A0A553NQS0	CP-type G domain-containing protein.	SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.999