STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_08648Uncharacterized protein. (221 aa)    
Predicted Functional Partners:
TCAL_00589
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
0.868
TCAL_07949
Uncharacterized protein.
   
 0.858
TCAL_07441
Protein SYS1 homolog; Involved in protein trafficking. Belongs to the SYS1 family.
    
 0.848
TCAL_01620
RIC1 domain-containing protein.
    
 0.842
TCAL_03399
Uncharacterized protein.
    
 0.831
TCAL_06454
Uncharacterized protein.
    
 0.800
TCAL_02484
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 0.790
TCAL_04343
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
0.778
TCAL_17276
Uncharacterized protein.
    
 0.770
TCAL_15026
GMP_PDE_delta domain-containing protein.
     
 0.768
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
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