STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_13053Uncharacterized protein. (1689 aa)    
Predicted Functional Partners:
TCAL_05948
Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.
     
 0.769
TCAL_10557
Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes.
    
 0.736
TCAL_06321
RING-type domain-containing protein.
   
 
 0.718
TCAL_07123
Uncharacterized protein.
      
 0.547
TCAL_01637
Uncharacterized protein.
      
 0.547
TCAL_00215
Uncharacterized protein; Belongs to the peptidase C1 family.
      
 0.543
TCAL_03786
Uncharacterized protein.
      
 0.542
TCAL_05735
Uncharacterized protein; Belongs to the AAA ATPase family.
      
 0.416
TCAL_00319
Uncharacterized protein; Belongs to the AAA ATPase family.
      
 0.416
TCAL_06652
Peptidase S72 domain-containing protein.
      
 0.410
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
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