STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_17030CAP_N domain-containing protein. (356 aa)    
Predicted Functional Partners:
TCAL_01303
SH3 domain-containing protein.
   
 
 0.901
TCAL_04598
Uncharacterized protein.
    
 
 0.849
TCAL_09251
ADF-H domain-containing protein.
   
 
 0.796
TCAL_01916
Glutaredoxin domain-containing protein.
    
   0.765
TCAL_00177
ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.
   
 0.739
TCAL_12391
ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.
   
 0.739
TCAL_06452
WD_REPEATS_REGION domain-containing protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
 0.709
TCAL_03976
Uncharacterized protein; Belongs to the actin family.
   
 0.666
TCAL_07443
Uncharacterized protein; Belongs to the actin family.
   
 0.661
TCAL_09231
Profilin; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations.
   
 0.652
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.