STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_11201Uncharacterized protein. (1216 aa)    
Predicted Functional Partners:
TCAL_07870
Uncharacterized protein.
    
 0.596
TCAL_09992
Uncharacterized protein.
    
  0.579
TCAL_01950
Uncharacterized protein.
    
 0.578
TCAL_08416
Uncharacterized protein.
    
 0.572
TCAL_11037
Uncharacterized protein.
    
 0.572
TCAL_07811
BBS1 domain-containing protein.
    
 0.559
TCAL_12627
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.559
TCAL_05637
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.550
TCAL_06696
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.550
TCAL_00078
Cullin domain-containing protein; Belongs to the cullin family.
    
 0.550
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.