STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM65498.1Uncharacterized iron-regulated protein. (292 aa)    
Predicted Functional Partners:
SFM65473.1
Predicted dehydrogenase.
 
     0.608
SFM65523.1
ABC-2 type transport system ATP-binding protein.
       0.552
SFM65544.1
Hypothetical protein.
       0.552
SFM65360.1
Hypothetical protein.
       0.543
SFM65382.1
Dinuclear metal center protein, YbgI/SA1388 family; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.
       0.543
SFM65406.1
Ribosomal-protein-alanine N-acetyltransferase.
       0.543
SFM65427.1
Predicted kinase, aminoglycoside phosphotransferase (APT) family.
       0.543
SFM65451.1
Choline kinase.
       0.543
SFN46010.1
Hypothetical protein.
    
  0.442
SFM84757.1
Hypothetical protein.
  
  
  0.404
Your Current Organism:
Algoriella xinjiangensis
NCBI taxonomy Id: 684065
Other names: A. xinjiangensis, Algoriella xinjiangensis Yang et al. 2016, CGMCC 1.10229, Flavobacteriaceae bacterium XJ109, JCM 16590, strain XJ109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.