STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN16426.1Site-specific recombinase XerD; Belongs to the 'phage' integrase family. (408 aa)    
Predicted Functional Partners:
SFN17418.1
Hypothetical protein.
  
     0.638
SFM82496.1
Phage integrase family protein.
  
     0.454
SFN38210.1
comF family protein.
   
    0.450
SFN16315.1
N-6 DNA Methylase.
       0.423
SFN16336.1
Metallo-beta-lactamase superfamily protein.
       0.423
SFN16358.1
Hypothetical protein.
       0.423
SFN16380.1
Hypothetical protein.
       0.423
SFN16402.1
Exonuclease SbcC.
       0.423
SFN16458.1
Hypothetical protein.
       0.407
Your Current Organism:
Algoriella xinjiangensis
NCBI taxonomy Id: 684065
Other names: A. xinjiangensis, Algoriella xinjiangensis Yang et al. 2016, CGMCC 1.10229, Flavobacteriaceae bacterium XJ109, JCM 16590, strain XJ109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.