STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F4PAF7_BATDJG-patch domain-containing protein. (581 aa)    
Predicted Functional Partners:
F4PAG6_BATDJ
Uncharacterized protein.
    
 0.764
F4NY09_BATDJ
RNA helicase.
    
 0.728
F4NTE9_BATDJ
RNA helicase.
    
  0.727
F4P4W3_BATDJ
U3 small nucleolar RNA-associated protein 22.
   
 
 0.665
F4NZM1_BATDJ
Uncharacterized protein.
    
 0.664
F4P7P9_BATDJ
Uncharacterized protein.
    
  0.660
F4NTX2_BATDJ
Uncharacterized protein.
    
  0.653
F4NS02_BATDJ
Uncharacterized protein.
    
 
 0.652
F4NSC0_BATDJ
Uncharacterized protein.
    
  0.652
F4NSI0_BATDJ
Uncharacterized protein; Belongs to the DEAD box helicase family.
    
  0.652
Your Current Organism:
Batrachochytrium dendrobatidis JAM81
NCBI taxonomy Id: 684364
Other names: B. dendrobatidis JAM81
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.