STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F4PB02_BATDJD-3-phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (311 aa)    
Predicted Functional Partners:
F4P646_BATDJ
Tryptophan synthase.
  
 0.903
F4P0P4_BATDJ
Phosphoserine aminotransferase.
  
 0.884
F4PB90_BATDJ
Uncharacterized protein; Belongs to the cytochrome b5 family.
  
 
 0.832
F4PBG6_BATDJ
DHFR domain-containing protein; Belongs to the dihydrofolate reductase family.
  
 0.821
F4PB30_BATDJ
Amino_oxidase domain-containing protein.
    
 0.747
F4P419_BATDJ
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
  
 0.681
F4P5P1_BATDJ
Uncharacterized protein.
  
 0.681
F4PAN2_BATDJ
Glyceraldehyde-3-phosphate dehydrogenase.
   
 0.680
F4PA61_BATDJ
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
  
 
 0.668
F4NRB3_BATDJ
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.663
Your Current Organism:
Batrachochytrium dendrobatidis JAM81
NCBI taxonomy Id: 684364
Other names: B. dendrobatidis JAM81
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.