STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMH79833.1Amino acid/amide ABC transporter, ATP-binding protein, 2, HAAT family. (261 aa)    
Predicted Functional Partners:
EMH79831.1
Amino acid/amide ABC transporter membrane protein, 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 0.996
EMH79830.1
Amino acid/amide ABC transporter membrane protein, 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 0.989
EMH79832.1
Amino acid/amide ABC transporter, ATP-binding protein, 1, HAAT family.
 
 
0.984
EMH79829.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
 
 0.983
EMH79834.1
Putative branched-chain amino acid permease (azaleucine resistance).
       0.768
EMH79835.1
Branched-chain amino acid transport protein.
       0.768
EMH79836.1
CsiD family protein.
       0.768
EMH80699.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
 
 0.673
msrA
methionine-S-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
       0.608
EMH79843.1
Putative protein, possibly involved in aromatic compounds catabolism.
    
  0.579
Your Current Organism:
alpha proteobacterium HIMB114
NCBI taxonomy Id: 684719
Other names: a. proteobacterium HIMB114
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