STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIC31548.1Putative TIM-barrel fold metal-dependent hydrolase; PFAM: Amidohydrolase. (282 aa)    
Predicted Functional Partners:
EIC31544.1
PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain.
 
  
 0.828
EIC28211.1
2-polyprenylphenol hydroxylase-like oxidoreductase; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain.
    
  0.781
EIC31545.1
PFAM: Luciferase-like monooxygenase; TIGRFAM: dimethyl sulfone monooxygenase SfnG.
 
   
 0.712
EIC29463.1
RraA family protein; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions.
    
 0.653
EIC31546.1
PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain.
    
 0.649
EIC28118.1
PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family.
  
 
 0.630
EIC31547.1
FMN reductase, MsuE subfamily; PFAM: NADPH-dependent FMN reductase; TIGRFAM: FMN reductase, MsuE subfamily.
 
     0.595
EIC30477.1
Cupin domain-containing protein; PFAM: Cupin domain.
 
  
  0.522
EIC28280.1
Hypothetical protein.
 
  
  0.519
EIC30454.1
Hypothetical protein; PFAM: Catalytic LigB subunit of aromatic ring-opening dioxygenase.
    
 0.506
Your Current Organism:
Methylomicrobium album
NCBI taxonomy Id: 686340
Other names: M. album BG8, Methylomicrobium album BG8, Methylomicrobium album str. BG8, Methylomicrobium album strain BG8
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.