STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001202025_01549Unannotated protein. (226 aa)    
Predicted Functional Partners:
GCA_001202025_01550
Unannotated protein.
 
     0.857
GCA_001202025_01552
Unannotated protein.
 
     0.851
GCA_001202025_01551
Unannotated protein.
 
     0.850
GCA_001202025_01193
Unannotated protein.
  
     0.770
GCA_001202025_00251
Unannotated protein.
  
     0.745
GCA_001202025_02449
Unannotated protein.
  
    0.684
GCA_001202025_01548
Unannotated protein.
 
     0.653
GCA_001202025_01547
Unannotated protein.
 
     0.598
Your Current Organism:
Pseudorhodobacter aquimaris
NCBI taxonomy Id: 687412
Other names: CCUG 58879, KCTC 23043, P. aquimaris, Pseudorhodobacter aquimaris Jung et al. 2012, Pseudorhodobacter sp. HDW-19, strain HDW-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.