STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001202025_03111Unannotated protein. (161 aa)    
Predicted Functional Partners:
GCA_001202025_03110
Unannotated protein.
 
0.999
GCA_001202025_03112
Unannotated protein.
 
 
 0.994
GCA_001202025_03107
Unannotated protein.
 
    0.992
GCA_001202025_03108
Unannotated protein.
 
    0.991
GCA_001202025_03113
Unannotated protein.
 
  
 0.991
GCA_001202025_03105
Unannotated protein.
 
    0.990
GCA_001202025_03109
Unannotated protein.
 
   
0.937
GCA_001202025_03100
Unannotated protein.
 
    0.898
GCA_001202025_03106
Unannotated protein.
 
 
  0.877
GCA_001202025_03101
Unannotated protein.
 
    0.871
Your Current Organism:
Pseudorhodobacter aquimaris
NCBI taxonomy Id: 687412
Other names: CCUG 58879, KCTC 23043, P. aquimaris, Pseudorhodobacter aquimaris Jung et al. 2012, Pseudorhodobacter sp. HDW-19, strain HDW-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.