STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACY30940.1Hypothetical transmembrane protein; COG2962, RarD, Predicted permeases. (294 aa)    
Predicted Functional Partners:
ACY30939.1
Major facilitator superfamily MFS_1; COG2814, AraJ, Arabinose efflux permease.
       0.618
ACY32402.1
Putative transmembrane protein; COG2252, Permeases.
  
     0.574
ACY31789.1
GCN5-related N-acetyltransferase; COG0456, RimI, Acetyltransferases.
  
     0.510
ACY31642.1
Hypothetical protein; COG2314, XynA, Predicted membrane protein.
  
     0.482
ACY30938.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
       0.477
ACY30950.1
Conserved hypothetical protein.
  
     0.464
ACY31541.1
COG3165, Uncharacterized protein conserved in bacteria.
  
     0.456
ACY32294.1
COG2866, Predicted carboxypeptidase.
  
     0.449
ACY32401.1
COG5373, Predicted membrane protein.
  
     0.419
ACY31042.1
VanZ like protein; COG5652, Predicted integral membrane protein.
  
     0.409
Your Current Organism:
Comamonas testosteroni
NCBI taxonomy Id: 688245
Other names: C. testosteroni CNB-2, Comamonas testosteroni CNB-2, Comamonas testosteroni str. CNB-2, Comamonas testosteroni strain CNB-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.