STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACY33008.1Sodium/hydrogen exchanger; COG0475, KefB, Kef-type K+ transport systems. (427 aa)    
Predicted Functional Partners:
ACY33009.1
Hypothetical conserved protein; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
 
     0.960
ACY34605.1
Putative lipoprotein; COG2913, SmpA, Small protein A (tmRNA-binding).
  
     0.721
ACY32401.1
COG5373, Predicted membrane protein.
  
     0.691
ACY31960.1
Hypothetical protein; COG4214, XylH, ABC-type xylose transport system.
  
     0.644
ACY31478.1
Putative transmembrane protein; COG3671, Predicted membrane protein.
  
     0.597
ACY33958.1
Conserved hypothetical protein; COG1523, PulA, Type II secretory pathway.
 
     0.570
ACY32338.1
COG3203, OmpC, Outer membrane protein (porin).
  
     0.539
ACY33278.1
COG3203, OmpC, Outer membrane protein (porin).
  
     0.539
ACY32294.1
COG2866, Predicted carboxypeptidase.
  
    0.536
ACY31642.1
Hypothetical protein; COG2314, XynA, Predicted membrane protein.
 
     0.519
Your Current Organism:
Comamonas testosteroni
NCBI taxonomy Id: 688245
Other names: C. testosteroni CNB-2, Comamonas testosteroni CNB-2, Comamonas testosteroni str. CNB-2, Comamonas testosteroni strain CNB-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.