STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACY33561.1Isocitrate dehydrogenase, NADP-dependent; COG2838, Icd, Monomeric isocitrate dehydrogenase; Belongs to the monomeric-type IDH family. (743 aa)    
Predicted Functional Partners:
ACY31434.1
COG0069, GltB, Glutamate synthase domain 2.
     
 0.974
ACY34130.1
Aconitate hydratase 2; COG1049, AcnB, Aconitase B; Belongs to the aconitase/IPM isomerase family.
  
 
 0.973
ACY32878.1
2-oxoglutarate dehydrogenase, E1 subunit; COG0567, SucA, 2-oxoglutarate dehydrogenase complex.
   
 
 0.961
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
  
  
 0.945
ACY30894.1
Electron transport complex, RnfABCDGE type, B; COG1146, Ferredoxin.
  
 
 0.942
ACY33557.1
Isocitrate dehydrogenase, NADP-dependent; COG0538, Icd, Isocitrate dehydrogenases.
    
 0.933
ACY35497.1
COG0015, PurB, Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
   
  0.930
argH
COG0165, ArgH, Argininosuccinate lyase.
     
 0.908
ACY31435.1
Glutamate synthase, NADH/NADPH, small subunit; COG0493, GltD, NADPH-dependent glutamate synthase beta chain andrelated oxidoreductases.
   
 
 0.906
ACY34415.1
COG0029, NadB, Aspartate oxidase.
    
  0.906
Your Current Organism:
Comamonas testosteroni
NCBI taxonomy Id: 688245
Other names: C. testosteroni CNB-2, Comamonas testosteroni CNB-2, Comamonas testosteroni str. CNB-2, Comamonas testosteroni strain CNB-2
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