STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACY34573.1Major facilitator superfamily MFS_1; COG2814, AraJ, Arabinose efflux permease. (505 aa)    
Predicted Functional Partners:
ACY34572.1
Globin; COG2346, Truncated hemoglobins.
       0.776
ACY31661.1
Drug resistance transporter, EmrB/QacA; COG2814, AraJ, Arabinose efflux permease; Belongs to the major facilitator superfamily.
  
  
  0.676
ACY34574.1
COG0583, LysR, Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.575
ACY34571.1
5'-Nucleotidase-like protein; COG0737, UshA, 5'-nucleotidase/2'; Belongs to the 5'-nucleotidase family.
       0.535
Your Current Organism:
Comamonas testosteroni
NCBI taxonomy Id: 688245
Other names: C. testosteroni CNB-2, Comamonas testosteroni CNB-2, Comamonas testosteroni str. CNB-2, Comamonas testosteroni strain CNB-2
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