STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV48734.1Protein of unknown function DUF695; InterPro IPR016097; IPR009671; KEGG: fnu:FN0296 putative cytoplasmic protein; PFAM: Domain of unknown function DUF695; Domain of unknown function DUF1260; SPTR: Putative uncharacterized protein; PFAM: Family of unknown function (DUF695); Protein of unknown function (DUF1260); TIGRFAM: conserved hypothetical protein, TIGR01619. (263 aa)    
Predicted Functional Partners:
ADV48731.1
Protein of unknown function DUF2314; COGs: COG3779 conserved hypothetical protein; InterPro IPR018756; KEGG: cpi:Cpin_1978 hypothetical protein; PFAM: Protein of unknown function DUF2314; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2314).
 
     0.718
ADV48733.1
ASCH domain protein; COGs: COG4405 conserved hypothetical protein; InterPro IPR007374; KEGG: gfo:GFO_1756 hypothetical protein; PFAM: ASCH domain; SPTR: Putative uncharacterized protein; PFAM: ASCH domain.
       0.590
ADV47661.1
Thrombospondin type 3 repeat-containing protein; InterPro IPR003367; KEGG: cat:CA2559_00005 transcriptional regulator, AraC family with parallel beta-helix repeat; PFAM: Thrombospondin, type 3-like repeat; SPTR: Transcriptional regulator, AraC family with Parallel beta-helix repeat.
  
     0.489
ADV48451.1
Hypothetical protein; KEGG: pfs:PFLU3675 putative flippase; SPTR: Membrane protein involved in the export of O-antigen and teichoic acid-like protein.
  
     0.484
ADV50987.1
KEGG: cpi:Cpin_6417 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.425
ADV48732.1
GCN5-related N-acetyltransferase; COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR000182; KEGG: zpr:ZPR_4646 acetyltransferase (GNAT) family protein; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Acetyltransferase (GNAT) family protein; PFAM: Acetyltransferase (GNAT) family.
       0.410
Your Current Organism:
Cellulophaga algicola
NCBI taxonomy Id: 688270
Other names: C. algicola DSM 14237, Cellulophaga algicola DSM 14237, Cellulophaga algicola IC166, Cellulophaga algicola str. DSM 14237, Cellulophaga algicola strain DSM 14237
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.