STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV49785.1COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006104; IPR006102; IPR006103; KEGG: gfo:GFO_1727 glycosyl hydrolase family protein; PFAM: Glycoside hydrolase, family 2, carbohydrate-binding; Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich; Glycoside hydrolase, family 2, TIM barrel; PRIAM: Beta-galactosidase; SPTR: Membrane or secreted glycosyl hydrolase, family 2; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain. (958 aa)    
Predicted Functional Partners:
ADV49788.1
COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006104; IPR006102; IPR006103; KEGG: sus:Acid_4901 glycoside hydrolase family protein; PFAM: Glycoside hydrolase, family 2, carbohydrate-binding; Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich; Glycoside hydrolase, family 2, TIM barrel; PRIAM: Beta-galactosidase; SPTR: Glycoside hydrolase family 2; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain.
 
  
 
0.949
ADV49810.1
COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006104; IPR006102; IPR006103; KEGG: gfo:GFO_1719 glycosyl hydrolase; PFAM: Glycoside hydrolase, family 2, carbohydrate-binding; Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich; Glycoside hydrolase, family 2, TIM barrel; PRIAM: Beta-galactosidase; SPTR: Secreted glycosyl hydrolase, family 2; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain.
  
  
 
0.929
ADV49802.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
 
 0.921
ADV48091.1
KEGG: fbc:FB2170_04735 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Melibiase.
  
 
 0.910
ADV49782.1
Beta-agarase; KEGG: caa:Caka_0973 beta-agarase; PRIAM: Beta-agarase; SPTR: Beta-agarase.
 
    0.910
ADV49932.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.908
glk
Glucokinase; COGs: COG0837 Glucokinase; InterPro IPR003836; KEGG: gvi:gll1169 glucokinase; PFAM: Glucokinase; PRIAM: Glucokinase; SPTR: Glucokinase; TIGRFAM: Glucokinase; PFAM: Glucokinase; TIGRFAM: glucokinase, proteobacterial type; Belongs to the bacterial glucokinase family.
     
 0.901
ADV49784.1
Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: caa:Caka_0377 sulfatase; PFAM: Sulfatase; SPTR: Sulfatase; PFAM: Sulfatase.
 
   0.825
ADV49781.1
Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: rba:RB198 N-acetylgalactosamine-4-sulfatase precursor; PFAM: Sulfatase; SPTR: N-acetylgalactosamine-6-sulfate sulfatase; PFAM: Sulfatase.
 
   0.823
xylA
COGs: COG2115 Xylose isomerase; HAMAP: Xylose isomerase; InterPro IPR013452; IPR001998; IPR012307; KEGG: fbc:FB2170_03855 xylose isomerase; PFAM: Xylose isomerase, TIM barrel domain; PRIAM: Xylose isomerase; SPTR: Xylose isomerase; TIGRFAM: Xylose isomerase, bacterial type; PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: xylose isomerase; Belongs to the xylose isomerase family.
    
 0.809
Your Current Organism:
Cellulophaga algicola
NCBI taxonomy Id: 688270
Other names: C. algicola DSM 14237, Cellulophaga algicola DSM 14237, Cellulophaga algicola IC166, Cellulophaga algicola str. DSM 14237, Cellulophaga algicola strain DSM 14237
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