STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC86788.1DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains. (460 aa)    
Predicted Functional Partners:
SKC57922.1
Signal transduction histidine kinase.
  
 0.951
SKC57929.1
Hypothetical protein; Partial gene; manually curated.
  
 0.951
SKC55283.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 0.927
SKC53923.1
Chemotaxis protein CheY-P-specific phosphatase CheC.
  
 0.874
SKC54327.1
Hypothetical protein.
  
 0.874
SKC86791.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 
  0.874
SKC85941.1
Signal transduction histidine kinase.
  
 0.856
SKC87092.1
Signal transduction histidine kinase.
  
 0.856
SKC60669.1
PAS domain S-box-containing protein.
  
 0.844
SKC58904.1
PAS domain S-box-containing protein.
   
 0.829
Your Current Organism:
Ohtaekwangia koreensis
NCBI taxonomy Id: 688867
Other names: Bacteroidetes bacterium 3B-2, CCUG 58939, DSM 25262, KCTC 23018, O. koreensis, Ohtaekwangia koreensis Yoon et al. 2011, strain 3B-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.