STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uxaCGlucuronate isomerase. (467 aa)    
Predicted Functional Partners:
SKC87633.1
Tagaturonate reductase.
 
 
 0.995
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
  
 0.979
SKC44607.1
L-ribulose-5-phosphate 4-epimerase.
     
 0.891
SKC87547.1
Altronate hydrolase.
  
 0.874
SKC50477.1
Inositol oxygenase.
    
  0.873
SKC44633.1
alpha-N-arabinofuranosidase.
     
 0.871
kduI
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
 
  
 0.871
SKC89683.1
F5/8 type C domain-containing protein; Belongs to the glycosyl hydrolase 43 family.
    
  0.870
SKC87535.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.848
SKC87603.1
DNA sulfur modification protein DndE; Belongs to the glycosyl hydrolase 28 family.
 
  
 0.842
Your Current Organism:
Ohtaekwangia koreensis
NCBI taxonomy Id: 688867
Other names: Bacteroidetes bacterium 3B-2, CCUG 58939, DSM 25262, KCTC 23018, O. koreensis, Ohtaekwangia koreensis Yoon et al. 2011, strain 3B-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.