STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJG21693.1Putative L-lactate dehydrogenase, hypothetical protein subunit YkgG. (234 aa)    
Predicted Functional Partners:
AJG21692.1
Putative L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF.
 
 
 0.988
AJG21694.1
Putative L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE.
 
 
 0.981
AJG18903.1
Putative L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF.
 
 
 0.950
AJG18902.1
Putative L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE.
 
 
 0.921
AJG21691.1
L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
 
  
 0.812
AJG20890.1
Glycolate dehydrogenase, iron-sulfur subunit GlcF.
 
 
 0.744
AJG23590.1
Glycolate dehydrogenase, subunit GlcD.
 
 
 0.740
AJG21695.1
Glycolate utilization operon transcriptional activator GlcC.
 
   
 0.739
AJG23480.1
Glycolate dehydrogenase, iron-sulfur subunit GlcF.
 
 
 0.728
AJG17902.1
FAD/FMN-containing dehydrogenase.
  
 
 0.705
Your Current Organism:
Cupriavidus basilensis
NCBI taxonomy Id: 68895
Other names: C. basilensis, CCUG 49340, DSM 11853, LMG 18990, LMG 19474, LMG:18990, LMG:19474, Ralstonia basilensis, Wautersia basilensis, strain RK1
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