STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_5226Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (406 aa)    
Predicted Functional Partners:
GLE_5225
RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family.
  0.924
GLE_5224
Metal ion efflux RND protein family.
 
  0.900
GLE_0498
RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family.
 
  0.859
GLE_4689
RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family.
 
  0.859
GLE_2568
Outer membrane efflux protein.
 
  0.813
GLE_5414
Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.
 
  0.805
GLE_5227
Oxidoreductase, short chain dehydrogenase/reductase family.
       0.800
GLE_5228
Hypothetical protein.
       0.773
GLE_4688
Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.
 
  0.763
GLE_3263
Metal ion efflux RND protein family.
  
  0.740
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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