STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TK0115Sodium/proline symporter, SSF family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (538 aa)    
Predicted Functional Partners:
TK0114
Hypothetical protein, conserved.
       0.801
TK0705
NADP-dependent glyceraldehyde-3-phosphate dehydrogenase (non-phosphorylating); Belongs to the aldehyde dehydrogenase family.
  
  
 0.669
TK0991
Carbon starvation protein A.
 
    0.659
TK0113
Hypothetical protein, conserved.
       0.634
TK0117
Sarcosine oxidase, beta subunit.
  
  
 0.619
TK0116
Sarcosine oxidase, alpha subunit.
       0.596
TK1489
Adenine phosphoribosyltransferase, fused to N-terminal DNA-binding domain.
   
  
 0.588
pxpA
Hypothetical protein, conserved, LamB/YcsF family; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
  
    0.567
TK2142
NhaC-type sodium/hydrogen antiporter.
 
  
 0.561
TK0986
Proton/glutamate symporter, SDF family.
  
  
 0.448
Your Current Organism:
Thermococcus kodakarensis
NCBI taxonomy Id: 69014
Other names: Pyrococcus sp. (strain KOD1), Pyrococcus sp. KOD1, T. kodakarensis KOD1, Thermococcus kodakaraensis KOD1, Thermococcus kodakarensis KOD1, Thermococcus kodakarensis str. KOD1, Thermococcus kodakarensis strain KOD1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.