STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TK0174Hypothetical protein, conserved, AMMECR1 family. (205 aa)    
Predicted Functional Partners:
TK1477
Hypothetical protein, conserved, DUF52 family; Belongs to the MEMO1 family.
    0.990
TK0893
Pyruvate fromate-lyase activating enzyme-related protein, radical SAM superfamily.
     0.974
TK0172
Hypothetical membrane protein, conserved, DUF373 family.
       0.676
TK0173
Hypothetical protein, conserved, DUF77 family.
       0.676
TK0170
Endonuclease IV.
       0.640
TK0171
Hypothetical protein, conserved.
       0.542
TK2203
Hypothetical protein, conserved.
 
     0.514
Your Current Organism:
Thermococcus kodakarensis
NCBI taxonomy Id: 69014
Other names: Pyrococcus sp. (strain KOD1), Pyrococcus sp. KOD1, T. kodakarensis KOD1, Thermococcus kodakaraensis KOD1, Thermococcus kodakarensis KOD1, Thermococcus kodakarensis str. KOD1, Thermococcus kodakarensis strain KOD1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.