STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TK1606Methyl-accepting chemotaxis protein. (251 aa)    
Predicted Functional Partners:
TK0629
Chemotaxis signal transduction protein.
 
 
 0.959
cheB
Chemotaxis protein-glutamate methylesterase, containing receiver domain; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 
 0.850
TK0631
Chemotaxis protein methyltransferase.
 
 
 0.843
TK1605
Hydrolase, metallo-beta-lactamase superfamily.
 
     0.824
TK1607
alanyl-tRNA synthetase-related protein (C-terminus).
       0.801
TK0635
Chemotaxis histidine kinase, flame shift.
 
  
 0.783
TK0634
Chemotaxis histidine kinase, flame shift.
 
  
 0.782
TK0632
Chemotaxis response regulator.
 
 
 0.670
atpD
Archaeal/vacuolar-type H+-ATPase, subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane.
       0.668
cheD
Chemotaxis protein cheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
 
 
 0.572
Your Current Organism:
Thermococcus kodakarensis
NCBI taxonomy Id: 69014
Other names: Pyrococcus sp. (strain KOD1), Pyrococcus sp. KOD1, T. kodakarensis KOD1, Thermococcus kodakaraensis KOD1, Thermococcus kodakarensis KOD1, Thermococcus kodakarensis str. KOD1, Thermococcus kodakarensis strain KOD1
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