STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glmAexo-beta-D-glucosaminidase; Exo-type enzyme that specifically cleaves the non-reducing terminal glycosidic bond of chitooligosaccharides. Catalyzes the hydrolysis of GlcN- GlcNAc to glucosamine (GlcN) and N-acetylglucosamine (GlcNAc). Involved in chitin degradation. Can also hydrolyze reduced chitobiose (GlcN2OH) and chitooligosaccharides of various chain lengths. (786 aa)    
Predicted Functional Partners:
glmD
Archaeal glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion. Involved in chitin degradation.
     
 0.962
TK1761
Beta-glycosidase, GH1 family; Belongs to the glycosyl hydrolase 1 family.
 
 
 0.960
dac
N-acetylchitobiose deacetylase; Deacylates the non-reducing end of diacetylchitobiose (GlcNAc2). Can also use N-acetylglucosamine (GlcNAc) and N- acetylchitotriose (GlcNAc3). Probably involved in chitin degradation.
    
 0.880
Pk-chiA
Chitinase, containing dual catalytic domains.
  
   
 0.816
TK1756
ABC-type dipeptide/oligopeptide transport system, ATPase component.
       0.801
TK1757
ABC-type dipeptide/oligopeptide transport system, ATPase component.
       0.801
TK1758
ABC-type dipeptide/oligopeptide transport system, permease component.
       0.801
TK1759
ABC-type dipeptide/oligopeptide transport system, permease component.
       0.801
TK0977
Pullulanase type II, GH13 family.
 
  
 0.778
TK1884
Alpha-amylase precursor, GH13 family.
  
   
 0.719
Your Current Organism:
Thermococcus kodakarensis
NCBI taxonomy Id: 69014
Other names: Pyrococcus sp. (strain KOD1), Pyrococcus sp. KOD1, T. kodakarensis KOD1, Thermococcus kodakaraensis KOD1, Thermococcus kodakarensis KOD1, Thermococcus kodakarensis str. KOD1, Thermococcus kodakarensis strain KOD1
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.