STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT35155.1DNA-binding transcriptional regulator, LacI/PurR family. (319 aa)    
Predicted Functional Partners:
GAT32290.1
DNA-binding transcriptional regulator, LacI/PurR family.
  
 
   0.755
GAT31848.1
DNA-binding transcriptional regulator, LacI/PurR family.
  
 
   0.742
GAT32405.1
DNA-binding transcriptional regulator, LacI/PurR family.
  
     0.733
GAT32622.1
DNA-binding transcriptional regulator, LacI/PurR family.
  
     0.717
GAT34423.1
DNA-binding transcriptional regulator, LacI/PurR family.
  
     0.709
GAT32252.1
GntR family transcriptional regulator.
  
     0.709
GAT35415.1
DNA-binding transcriptional regulator, LacI/PurR family.
  
     0.701
GAT32217.1
LacI family transcriptional regulator.
  
     0.696
GAT34607.1
DNA-binding transcriptional regulator, LacI/PurR family.
  
     0.691
GAT32231.1
DNA-binding transcriptional regulator, LacI/PurR family.
  
     0.691
Your Current Organism:
Terrimicrobium sacchariphilum
NCBI taxonomy Id: 690879
Other names: CGMCC 1.5168, JCM 17479, Spartobacteria bacterium NM5, T. sacchariphilum, Terrimicrobium sacchariphilum Qiu et al. 2014 emend. Hahnke et al. 2016, strain NM-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.