STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANQ21858.1HPP family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (150 aa)    
Predicted Functional Partners:
ANQ21787.1
HPP domain containing protein+B94; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.769
ANQ21859.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.690
ANQ21857.1
Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.664
ANQ21856.1
Aspartate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.574
ANQ21855.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.566
ANQ21285.1
Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TorC/TorY family.
  
     0.467
ANQ23711.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.444
ANQ22185.1
Histone deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.428
ANQ21854.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.416
ANQ21332.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.408
Your Current Organism:
Vibrio natriegens
NCBI taxonomy Id: 691
Other names: ATCC 14048, Beneckea natriegens, CAIM 12, CCUG 16371, CCUG 4980 A, CIP 103193, DSM 759, IFO 15636, LMG 10935, LMG:10935, NBRC 15636, NCCB 73019, NCMB 857, NCMB:857, NCTC 11319, Pseudomonas natriegens, V. natriegens
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