STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H696_03744UPF0020 domain-containing protein. (540 aa)    
Predicted Functional Partners:
H696_00197
Uncharacterized protein.
   
 0.983
H696_00916
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
 
      0.818
H696_04135
tRNA-dihydrouridine synthase 1.
   
  
 0.769
H696_02591
tRNA (adenine(58)-N(1))-methyltransferase.
   
  
 0.767
H696_00813
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family.
   
  
 0.758
H696_04370
Uncharacterized protein.
   
   0.755
H696_06227
Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.
   
 
 0.750
H696_05654
Uncharacterized protein.
   
 
 0.746
H696_02630
Methyltransferase.
   
 
 0.746
H696_04416
WD_REPEATS_REGION domain-containing protein.
   
    0.745
Your Current Organism:
Fonticula alba
NCBI taxonomy Id: 691883
Other names: F. alba
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