STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H696_02417Uncharacterized protein. (636 aa)    
Predicted Functional Partners:
H696_00247
Ubiquitin-40S ribosomal protein S27a.
    
  0.644
H696_02021
Ubiquitin-60S ribosomal protein L40.
    
  0.633
H696_03388
SGS domain-containing protein.
    
 0.593
H696_03490
Uncharacterized protein.
    
 0.544
H696_01956
TKL/MLK protein kinase.
    
 0.544
H696_01783
USP domain-containing protein; Belongs to the peptidase C19 family.
    
 0.527
H696_00597
26S proteasome non-ATPase regulatory subunit 14.
    
  0.429
H696_01409
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
 
 0.427
Your Current Organism:
Fonticula alba
NCBI taxonomy Id: 691883
Other names: F. alba
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.