STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prpESerine/threonine protein phosphatase; Bis(5'-nucleosyl)-tetraphosphatase prpE [asymmetrical]; Ap4A hydrolase; Diadenosine 5',5'''-P1,P4-tetraphosphate asymmetrical hydrolase; Diadenosine tetraphosphatase;, Metallophosphoesterase, Calcineurin-like phosphoesterase. (249 aa)    
Predicted Functional Partners:
RBAM_032950
O-antigen biosynthesis protein; Putative polypeptide N-acetylgalactosaminyltransferase-like protein 1; Polypeptide GalNAc transferase-like protein 1; pp-GaNTase-like protein 1; GalNAc-T-like protein 1; Protein-UDP acetylgalactosaminyltransferase-like protein 1; UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase-like protein 1;, Glycosyl transferase, family 2, Glycosyl transferase family 2.
   
   0.810
ybaJ
Putative methyltransferase.
   
   0.800
yjbQ
Putative Na+/H+ antiporter.
       0.689
fabI
Enoyl-acyl carrier protein reductase.
       0.447
mgtE
Magnesium transport via permease (no H+); 'cell envelope and cellular processes; Transport/binding proteins and lipoproteins'.
       0.447
p107SPP1
Phage related protein.
  
     0.412
ydcA
Conserved hypothetical protein.
 
   
 0.400
Your Current Organism:
Bacillus amyloliquefaciens DSM 7 ATCC 23350
NCBI taxonomy Id: 692420
Other names: B. amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens ATCC 23350, Bacillus amyloliquefaciens DSM 7, Bacillus amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens str. DSM 7, Bacillus amyloliquefaciens strain DSM 7
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