STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yngAPutative conserved membrane protein. (135 aa)    
Predicted Functional Partners:
yngB
Putative UTP-sugar-phosphate uridylyltransferase.
  
  
 0.816
ykcB
Putative integral membrane protein; putative glycosyl transferase.
 
  
 0.695
yngC
Putative integral inner membrane protein.
     
 0.642
ykcC
Putative glycosyltransferase.
 
  
 0.561
yobL
Putative phage DNA manipulating enzyme.
  
     0.504
yhbE
Conserved hypothetical protein.
  
     0.489
yhbF
Conserved hypothetical protein.
  
     0.475
ytxC
Conserved hypothetical protein.
  
    0.465
tuaE
Putative polymerase of teichuronic acid repeating units.
 
    0.461
ydhE
Uncharacterized UDP-glucosyltransferase yjiC;, UDP-glucuronosyl/UDP-glucosyltransferase.
  
     0.448
Your Current Organism:
Bacillus amyloliquefaciens DSM 7 ATCC 23350
NCBI taxonomy Id: 692420
Other names: B. amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens ATCC 23350, Bacillus amyloliquefaciens DSM 7, Bacillus amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens str. DSM 7, Bacillus amyloliquefaciens strain DSM 7
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