STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ypjGConserved hypothetical protein; 18: Unknown function. (237 aa)    
Predicted Functional Partners:
ypjH
Putative enzyme in leucine catabolism or biotin metabolism.
 
  
 0.983
cca
tRNA nucleotidyltransferase.
  
  
 0.944
mgsA
Methylglyoxal synthase.
  
  
 0.942
dapB
Dihydrodipicolinate reductase.
  
    0.889
birA
Biotin acetyl-CoA-carboxylase ligase and biotin regulon repressor.
  
  
 0.833
ypjD
Nucleotide phosphohydrolase.
 
  
 0.808
yllA
Putative nucleoid associated protein.
 
   
 0.790
RBAM_037560
Uncharacterized protein ypjG;, N-acetylglucosaminyl phosphatidylinositol deacetylase, GlcNAc-PI de-N-acetylase.
  
   
 0.722
yphP
Conserved hypothetical protein.
  
   
 0.718
yqiW
Conserved hypothetical protein.
  
     0.643
Your Current Organism:
Bacillus amyloliquefaciens DSM 7 ATCC 23350
NCBI taxonomy Id: 692420
Other names: B. amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens ATCC 23350, Bacillus amyloliquefaciens DSM 7, Bacillus amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens str. DSM 7, Bacillus amyloliquefaciens strain DSM 7
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.