STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
argHArgininosuccinate lyase. (458 aa)    
Predicted Functional Partners:
argG
Argininosuccinate synthase.
 
 
 0.999
argB
N-acetylglutamate 5-phosphotransferase (acetylglutamate kinase).
 
  
 0.972
argF
Ornithine carbamoyltransferase.
 
  
 0.967
argC
N-acetylglutamate gamma-semialdehyde dehydrogenase.
 
  
 0.965
argD
N-acetylornithine aminotransferase.
 
  
 0.934
purB
Adenylosuccinate lyase.
    
0.923
argJ
Ornithine acetyltransferase; amino-acid acetyltransferase.
 
  
 0.922
ansB
L-aspartase (aspartate ammonia lyase).
     
0.915
nos
Nitric oxide synthase oxygenase; 'other functions; Detoxification'.
     
  0.900
mdh
Malate dehydrogenase.
   
 0.837
Your Current Organism:
Bacillus amyloliquefaciens DSM 7 ATCC 23350
NCBI taxonomy Id: 692420
Other names: B. amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens ATCC 23350, Bacillus amyloliquefaciens DSM 7, Bacillus amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens str. DSM 7, Bacillus amyloliquefaciens strain DSM 7
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