STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BG36_08090Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (591 aa)    
Predicted Functional Partners:
BG36_08085
Signal peptide protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.954
BG36_08745
Pilus assembly protein CpaC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial secretin family.
 
  
 0.755
BG36_08760
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.733
BG36_23940
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.640
BG36_00710
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.620
BG36_17790
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.616
BG36_23865
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.606
BG36_08080
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.574
BG36_23290
DoxX family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.571
BG36_08695
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.564
Your Current Organism:
Aquamicrobium defluvii
NCBI taxonomy Id: 69279
Other names: A. defluvii, CIP 105610, DSM 11603, strain NKK
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.