STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N756_GASACSi:dkey-225n22.4. (958 aa)    
Predicted Functional Partners:
G3PGE1_GASAC
Collagen, type VI, alpha 1.
  
0.610
G3PC67_GASAC
Uncharacterized protein.
    
   0.586
G3PC70_GASAC
Uncharacterized protein.
    
   0.586
G3PC74_GASAC
Uncharacterized protein.
    
   0.586
G3N6V9_GASAC
Si:ch211-157b11.8.
      
 0.551
G3Q211_GASAC
Si:dkeyp-44a8.4.
  
   
0.534
G3PNC7_GASAC
Collagen, type XV, alpha 1b.
  
 
 
0.517
G3N613_GASAC
LAM_G_DOMAIN domain-containing protein.
  
 
 
0.500
COL6A2
Collagen type VI alpha 2 chain.
  
0.499
G3PG93_GASAC
Collagen, type VI, alpha 2.
  
0.491
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.