STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NMN5_GASACPNN-interacting serine/arginine-rich protein. (668 aa)    
Predicted Functional Partners:
G3PGD1_GASAC
LUC7-like 3 pre-mRNA splicing factor.
   
  
 0.999
G3PFS1_GASAC
Pinin, desmosome associated protein.
   
 
 0.933
G3N9I3_GASAC
Myb-like, SWIRM and MPN domains 1.
   
 0.916
G3P6G7_GASAC
Actin-like 6A; Belongs to the actin family.
    
 0.895
G3PUN5_GASAC
PHD finger protein 10.
    
 0.873
G3Q062_GASAC
Si:ch211-114c17.1.
   
  
 0.871
G3Q7E4_GASAC
AT rich interactive domain 2 (ARID, RFX-like).
    
 0.864
G3P423_GASAC
Serine and arginine rich splicing factor 11.
   
 
 0.863
SMARCB1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.
    
 0.858
G3Q368_GASAC
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.
    
 0.858
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.