STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NP04_GASACChitinase domain containing 1; Belongs to the glycosyl hydrolase 18 family. (388 aa)    
Predicted Functional Partners:
G3P322_GASAC
WD repeat domain 90.
    
 
 0.826
G3NNX1_GASAC
Enkurin, TRPC channel interacting protein.
    
 
 0.733
G3NNG0_GASAC
Uncharacterized protein.
    
 
 0.718
G3P3R8_GASAC
EF-hand domain (C-terminal) containing 1.
    
 
 0.718
G3P3Z6_GASAC
EF-hand domain (C-terminal) containing 2.
    
 
 0.718
G3Q7I5_GASAC
Heat shock protein 9; Belongs to the heat shock protein 70 family.
    
   0.710
RAD21
RAD21 cohesin complex component.
    
 
 0.690
G3NSJ5_GASAC
RAD21 cohesin complex component a.
    
 
 0.690
G3PCW0_GASAC
Uncharacterized protein.
    
 
 0.690
G3P8S5_GASAC
Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family.
   
    0.684
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.