STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hif-1aUncharacterized protein. (760 aa)    
Predicted Functional Partners:
G3PK47_GASAC
UBX domain protein 7.
    
 0.987
G3N6Q4_GASAC
Von Hippel-Lindau tumor suppressor.
   
 0.961
G3NE47_GASAC
Elongin C paralog a; Belongs to the SKP1 family.
    
 0.928
G3P4H7_GASAC
Egl-9 family hypoxia-inducible factor 2.
   
 0.916
G3NJJ4_GASAC
Egl-9 family hypoxia-inducible factor 1a.
   
 0.914
G3PCY4_GASAC
Aryl hydrocarbon receptor nuclear translocator.
   
0.914
G3PLE6_GASAC
Aryl-hydrocarbon receptor nuclear translocator 2.
   
0.914
G3P0S8_GASAC
Hypoxia inducible factor 1 subunit alpha inhibitor.
    
 0.907
G3NAC9_GASAC
Cullin 2; Belongs to the cullin family.
    
 0.894
G3NM42_GASAC
E1A binding protein p300 a.
    
 0.878
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.