STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSRB1Methionine sulfoxide reductase B1a. (92 aa)    
Predicted Functional Partners:
G3Q614_GASAC
Thioredoxin; Belongs to the thioredoxin family.
  
 0.785
G3NRQ7_GASAC
NME/NM23 family member 8; Belongs to the NDK family.
  
 0.777
G3N840_GASAC
Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
   
 
 0.730
G3NRI7_GASAC
Methionine sulfoxide reductase A.
  
 
 0.730
G3P4Y8_GASAC
Si:ch1073-358c10.1.
  
 
 0.730
G3NZS1_GASAC
DnaJ (Hsp40) homolog, subfamily C, member 10.
   
 0.638
G3PHH9_GASAC
Mitochondrial ribosomal protein L33.
  
 
 0.634
G3PY64_GASAC
Mitochondrial ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.629
G3Q8F8_GASAC
Mitochondrial ribosomal protein L4.
  
 
 0.627
G3NVI0_GASAC
Mitochondrial ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
   
 
 0.619
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.