STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3PMI9_GASACSi:ch211-186j3.6; Cadherins are calcium-dependent cell adhesion proteins. (2529 aa)    
Predicted Functional Partners:
G3N550_GASAC
Uncharacterized protein.
    
 0.761
G3NRF1_GASAC
Uncharacterized protein.
    
 0.761
G3NRM5_GASAC
Catenin (cadherin-associated protein), beta 1.
    
 0.761
G3Q2Y3_GASAC
Junction plakoglobin a.
    
 0.761
G3Q1L6_GASAC
Catenin (cadherin-associated protein), alpha 2.
    
 0.746
G3Q378_GASAC
Catenin (cadherin-associated protein), alpha 1.
    
 0.746
G3PBS7_GASAC
Four-jointed box kinase 1.
   
 0.706
G3NCR6_GASAC
Catenin (cadherin-associated protein), delta 2a.
    
 0.681
PKP4
Plakophilin 4.
    
 0.681
ARVCF
ARVCF delta catenin family member b.
    
 0.681
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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