STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3QCE2_GASACGTF2I repeat domain containing 1. (969 aa)    
Predicted Functional Partners:
G3QC26_GASAC
Transducin (beta)-like 2.
      
 0.519
G3NLF9_GASAC
Protein kinase cAMP-dependent type I regulatory subunit alpha.
   
 
  0.516
G3NXN9_GASAC
Bromodomain adjacent to zinc finger domain, 1B.
      
 0.507
G3NRN5_GASAC
NOP2/Sun RNA methyltransferase 5; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
      
 0.493
G3N5P0_GASAC
Replication factor C (activator 1) 2.
      
 0.483
G3P630_GASAC
WD repeat domain 53.
      
 0.481
G3PIA4_GASAC
Peptidylprolyl isomerase.
      
 0.446
G3QCG0_GASAC
Si:ch211-284f22.3.
      
 0.443
G3NTR8_GASAC
Si:ch211-263k4.2.
    
 
 0.419
G3NWB3_GASAC
Uncharacterized protein.
    
 
 0.419
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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