STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g29825Uncharacterized protein. (341 aa)    
Predicted Functional Partners:
CBR_g49334
Uncharacterized protein.
  
   
 0.612
CBR_g44937
Uncharacterized protein.
  
    0.533
CBR_g19770
Uncharacterized protein.
  
    0.509
CBR_g78876
Uncharacterized protein.
  
    0.480
CBR_g11898
Uncharacterized protein.
  
     0.470
CBR_g3552
CAAD domain-containing protein.
  
    0.456
CBR_g29411
Polyketide_cyc domain-containing protein.
  
    0.446
CBR_g79494
VKc domain-containing protein.
  
    0.442
CBR_g3554
CAAD domain-containing protein.
  
    0.442
CBR_g37206
PPIase cyclophilin-type domain-containing protein.
  
     0.426
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.