STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g4196Reverse transcriptase domain-containing protein. (1267 aa)    
Predicted Functional Partners:
CBR_g42122
IGPS domain-containing protein.
    
 0.922
CBR_g49893
Uncharacterized protein.
  
 
 0.859
CBR_g23983
Uncharacterized protein.
  
 
 0.859
CBR_g169
Uncharacterized protein.
  
 0.849
CBR_g179
Uncharacterized protein.
  
 0.849
CBR_g168
Uncharacterized protein.
  
 0.849
CBR_g178
Uncharacterized protein.
  
 0.849
CBR_g175
Uncharacterized protein.
  
 0.849
CBR_g45651
Uncharacterized protein.
  
 0.849
CBR_g48674
Uncharacterized protein.
  
 0.849
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
Server load: low (24%) [HD]